PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK02366.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family NAC
Protein Properties Length: 334aa    MW: 37501.9 Da    PI: 9.649
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK02366.2genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.43.2e-54281551128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                lppGfrFhPtdeel+++yL +k+++ ++++ ++i +vd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ ++el
  PK02366.2  28 LPPGFRFHPTDEELITFYLINKISDPTFTA-RAIGDVDLNKSEPWELPAKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSvTSEL 126
                79*************************999.89***************99999****************************************9989999 PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                vg+kktLvfy+grap+gek++Wvmheyr+
  PK02366.2 127 VGMKKTLVFYRGRAPRGEKSNWVMHEYRI 155
                ***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-6226176IPR003441NAC domain
PROSITE profilePS5100560.35928176IPR003441NAC domain
PfamPF023657.7E-2829155IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
XQKEKEEIRR DMGGGSSDDN KVDTTEKLPP GFRFHPTDEE LITFYLINKI SDPTFTARAI  60
GDVDLNKSEP WELPAKAKMG EKEWYFFSLR DRKYPTGVRT NRATNTGYWK TTGKDKEIFN  120
SVTSELVGMK KTLVFYRGRA PRGEKSNWVM HEYRINSKSA FRTSKDEWVV CRVFQKSAGA  180
KKYPTTSTQT RTMNPYALID QTQTMLQYSS PMMQLPGDPT GHFLFARNNC NNITNNPHEL  240
AELSRVLRGT TSGSTNPLNI LPSQYNYPVP ILPGGGGGGC LTISGLNLNL GGPPPPQAPP  300
MQPNNNHHQP QIMNLNQQNI MSSNSGSFGH HDHN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-552418213171NO APICAL MERISTEM PROTEIN
1ut4_B1e-552418213171NO APICAL MERISTEM PROTEIN
1ut7_A1e-552418213171NO APICAL MERISTEM PROTEIN
1ut7_B1e-552418213171NO APICAL MERISTEM PROTEIN
3swm_A2e-552418216174NAC domain-containing protein 19
3swm_B2e-552418216174NAC domain-containing protein 19
3swm_C2e-552418216174NAC domain-containing protein 19
3swm_D2e-552418216174NAC domain-containing protein 19
3swp_A2e-552418216174NAC domain-containing protein 19
3swp_B2e-552418216174NAC domain-containing protein 19
3swp_C2e-552418216174NAC domain-containing protein 19
3swp_D2e-552418216174NAC domain-containing protein 19
4dul_A1e-552418213171NAC domain-containing protein 19
4dul_B1e-552418213171NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015885188.11e-135PREDICTED: NAC domain-containing protein 79 isoform X4
TrEMBLK7KIT41e-132K7KIT4_SOYBN; Uncharacterized protein
STRINGVIT_04s0008g02710.t011e-131(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50733253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.21e-104NAC domain containing protein 38